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What's new

Dec 15, 2009 : EMBRYS 1.0 (primary version) is now available.

Dec 15, 2009 : The article regarding to EMBRYS website was published on Developmental Cell, December issue.

Aug 29, 2008 : EMBRYS β-version is now open!

The details of EMBRYS database are described in the following article:

Yokoyama S and Ito Y, et. al.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58.
Developmental Cell 17, 836-848, December 15, 2009

Please cite this article as a reference of EMBRYS database!



Welcome to EMBRYS!

EMBRYS is a digital atlas of in situ gene expression patterns in the developing mouse embryo constructed by the Systems BioMedicine Laboratory (Asahara's Lab) at the National Research Institute for Child Health and Development. This database contains the expression patterns of 1,520 transcription factors (TFs) and TF-related factors in mouse embryos at E9.5, 10.5, and 11.5. Expression patterns are determined by whole-mount in situ hybridization with digoxygenin-labeled riboprobes. [See more...]

To retrieve gene expression patterns, searches can be initiated by entering the information in the box located at the top of this page, and click "Search". Queries can be made using either gene symbol or NCBI Gene ID. Following query, the images are displayed by clicking the desired gene symbol listed in the box. [See more...]

Annotation of gene expression was evaluated on each tissues and organs (see Methods: Annotation of Gene Expression Patterns) and the data can be downroaded from here (MS-Excel file).